Yes, Ras, you have crossed polarity - where those lines go from one side of the layout to the other you have positive joining to negative and view versa. There are pieces of LGB track which solve the problem but they are pricey. If you go here and download the guide, it will tell you something about the problem.
It is more complicated than I suggest, as in some places a line from one side to the other will give crossed polarity, and in others it won't! I'll think further on it with your diagram in front of me.